Navdeep Jaitly
Expertise
Navdeep Jaitly
Mr. Jaitly's focus is in the development of algorithms for large scale analysis of Mass Spectrometry data. His interests lies in application and development of data mining algorithms and statistical methods for the purpose of feature discovery, pattern analysis and assessment of confidence in results from MS and MS/MS data.
Education
- MMath, Computer Science, University of Waterloo, 2000
- B.A., Computer Science & Mathematics, Hanover College, 1998
Honors and Awards
- William Lowell Putnam Mathematics Competition (top 100), December 1996
- Winner of Indian National Mathematics Olympiads, 1993
Patents
- P Kearney, N Jaitly, and K Eng. "Constellation Mapping: Software and Methods to match complex peptide maps using nonlinear alignment methods." (Patent Application Filed).
- S Swamy, A Furtos-Matei, N Jaitly, P Kearney, and P Thibault. "Automated N-Linked Glycopeptide Identification and Analysis." (Patent Application Filed).
Selected Publications
Gupta N, S Tanner, N Jaitly, JN Adkins, MS Lipton, R Edwards, MF Romine, A Osterman, V Bafna, RD Smith, and PA Pevzner. 2007. "Whole proteome analysis of post-translational modifications: applications of mass-spectrometry for proteogenomic annotation." Genome Research 17(9):1362-1377. doi:0.1101/gr.6427907.
Liu T, ME Belov, N Jaitly, W Qian, and RD Smith. 2007. "Accurate Mass Measurements in Proteomics." Chemical Reviews 107(8):3621-3653. doi:10.1021/cr068288j.
Monroe ME, N Tolic, N Jaitly, JL Shaw, JN Adkins, and RD Smith. 2007. "VIPER: an advanced software package to support high-throughput LC-MS peptide identification." Bioinformatics 23(15- August 2007):2021-2023. doi:10.1093/bioinformatics/btm281.
Yang F, N Jaitly, H Jayachandran, Q Lou, ME Monroe, X Du, MA Gritsenko, R Zhang, DJ Anderson, SO Purvine, JN Adkins, RJ Moore, HM Mottaz, S Ding, MS Lipton, DG Camp, II, HR Udseth, RD Smith, and SS Rossie. 2007. "Applying a Targeted Label-free Approach using LC-MS AMT Tags to Evaluate Changes in Protein Phosphorylation Following Phosphatase Inhibition." Journal of Proteome Research 6(11):4489-4497. doi:10.1021/pr070068e.
Jaitly N, ME Monroe, VA Petyuk, TRW Clauss, JN Adkins, and RD Smith. 2006. "Robust Algorithm for Alignment of Liquid Chromatography-Mass Spectrometry Analyses in an Accurate Mass and Time Tag Data Analysis Pipeline." Analytical Chemistry 78(21):7397-7409.